PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033601.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 232aa    MW: 26031.7 Da    PI: 4.978
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033601.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS61.12.3e-19144224290374
         GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++ ei+n+v+ eg++r+erhe++ +W   +++aGF++  l+   ++qa++++  v+  dgy+   e+++l+lgWk+rp++ +SaW+
  Pbr033601.1 144 VEHEIRNIVTFEGSNRIERHERADQW---IGRAGFQETGLK--CTSQARMMMISVYgCDGYTTATEKDCLLLGWKGRPIMLASAWQ 224
                  6789**********************...789****99996..67899999999888****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035147.8E-17144224IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MEGFNAWLFF TLHESLNHDL SIRRFCLARL EQEQGGGRGG GEGAEQERIL LPRLTNLSTA  60
SSTWIIAFAL VIMTFNPWRN NKVVVVVVVL SIEYSDQDGI ETFSMVDDLY GVVLIMMEAE  120
DDHVDTSGLV DDFPVSKTKM RPRVEHEIRN IVTFEGSNRI ERHERADQWI GRAGFQETGL  180
KCTSQARMMM ISVYGCDGYT TATEKDCLLL GWKGRPIMLA SAWQARSVSS S*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2555633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-16RGA-like 1